Metrika

  • citati u SCIndeksu: 0
  • citati u CrossRef-u:0
  • citati u Google Scholaru:[]
  • posete u poslednjih 30 dana:7
  • preuzimanja u poslednjih 30 dana:5

Sadržaj

članak: 9 od 24  
Back povratak na rezultate
2018, vol. 55, br. 2, str. 95-102
Molekularni diverzitet i polimorfizam mikrosatelitskih markera savremenih hibrida kukuruza
Naučni institut za ratarstvo i povrtarstvo, Novi Sad, Srbija

e-adresasanja.mikic@ifvcns.ns.ac
Projekat:
Unapređenje proizvodnje kukuruza i sirka u uslovima stresa (MPNTR - 31073)

Sažetak
Cilj ovog rada bio je da se proceni genetički diverzitet 97 savremenih hibrida kukuruza koji se gaje u Srbiji pomoću 12 mikrosatelitskih markera. Od ukupno 89 alela, prosečno je utvrđeno 7.4 alela po lokusu. Vrednost polimorfnosti pojedinačnih lokusa (PIC) kretala se od 0.42, za marker umc1792, do 0.81, za marker dupssr10, sa prosekom od 0.64. Vrednosti Ritlandovog koeficijenta srodnosti varirale su između 0.787 i -0.129. Osam markera je bilo dovoljno da razdvoji hibride sa jedinstvenim genotipovima. Analiza glavnih koordinata razdvojila je grupu ranih i grupu kasnih hibrida, iako je diferencijacija između grupa bila niska (Fst = 0.4%). Dva markera, bnlg1556 i umc1075, su najviše doprinela razdvajanju ranih i kasnih genotipova. Vrednosti parametara molekularnog genetičkog diverziteta bile su veće kod ranih nego kod kasnih hibirida, što ukazuje na širu genetičku osnovu prve grupe. Visok nivo polimorfizma markera ukazuje na njihovu podobnost za određivanje molekularnog profila hibirida (tzv. fingerprinting).
Reference
Bernardo, R., Romero-Severson, J., Hauser, J., Doerge, R. W., Hookstra, G., Ziegle, J., Joe, L. (2000) Parental contribution and coefficient of coancestry among maize inbreds: pedigree, RFLP, and SSR data. TAG Theoretical and Applied Genetics, 100(3-4): 552-556
Buckler, E.S., Gaut, B.S., McMullen, M.D. (2006) Molecular and functional diversity of maize. Current Opinion in Plant Biology, 9(2): 172-176
Chen, J., Zavala, C., Ortega, N., Petroli, C., Franco, J., Burgueño, J., Costich, D.E., Hearne, S.J. (2016) The Development of Quality Control Genotyping Approaches: A Case Study Using Elite Maize Lines. PLoS One, 11(6): e0157236
Duvick, D.N. (2001) Biotechnology in the 1930s: the development of hybrid maize. Nature Reviews Genetics, 2(1): 69-74
Garcia, A.A. F., Benchimol, L.L., Barbosa, A.M. M., Geraldi, I.O., Souza, Jr. C.L., de Souza, A.P. (2004) Comparison of RAPD, RFLP, AFLP and SSR markers for diversity studies in tropical maize inbred lines. Genetics and Molecular Biology, 27(4): 579-588
Guzman, P.S., Lamkey, K.R. (2000) Effective Population Size and Genetic Variability in the BS11 Maize Population. Crop Science, 40(2): 338
Heckenberger, M., Bohn, M., Melchinger, A. E. (2005) Identification of Essentially Derived Varieties Obtained from Biparental Crosses of Homozygous Lines. Crop Science, 45(3): 1120
Jones, E. S., Sullivan, H., Bhattramakki, D., Smith, J. S. C. (2007) A comparison of simple sequence repeat and single nucleotide polymorphism marker technologies for the genotypic analysis of maize (Zea mays L.). Theoretical and Applied Genetics, 115(3): 361-371
Jones, L., Wall, S., Nelson, B., Smith, S. (2010) Varietal identification in maize: Are sixteen SNP markers sufficient?. u: MT/12/15 'Report on Developments in UPOV Conceming Biochemical and Molecular Techniques’. Twelfth Session of the Working Group on Biochemical and Molecular Techniques, and DNA Profiling in Particular
Jost, L. (2008) G ST and its relatives do not measure differentiation. Molecular Ecology, 17(18): 4015-4026
Kozhukhova, N. E., Sivolap, Yu. M. (2004) Identification and Registration of Maize Genotypes with the Use of Molecular Markers. Russian Journal of Genetics, 40(1): 49-55
Le, C.V., Bazante, F., Baril, C., Guiard, J., Zhang, D. (2005) Assessing temporal changes in genetic diversity of maize varieties using microsatellite markers. Theoretical and Applied Genetics, 110(2): 294-302
Lu¨bberstedt, T., Melchinger, A.E., Dußle, C., Vuylsteke, M., Kuiper, M. (2000) Relationships among Early European Maize Inbreds. Crop Science, 40(3): 783
Maccaferri, M., Sanguineti, M.C., Xie, C., Smith, J.S.C., Tuberosa, R. (2007) Relationships among durum wheat accessions. II. A comparison of molecular and pedigree information. Genome, 50(4): 385-399
Matsuoka, Y., Mitchell, S. E., Kresovich, S., Goodman, M., Doebley, J. (2002) Microsatellites in Zea - variability, patterns of mutations, and use for evolutionary studies. Theoretical and Applied Genetics, 104(2): 436-450
Mikić, S., Kondić-Špika, A., Brbaklić, L., Stanisavljević, D., Ćeran, M., Trkulja, D., Mitrović, B. (2017) Molecular and phenotypic characterisation of diverse temperate maize inbred lines in Southeast Europe. Zemdirbyste-Agriculture, 104(1): 31-40
Nei, M. (1987) Molecular Evolutionarp Genetics. New York: Columbia University Press
Noli, E., Teriaca, M.S., Conti, S. (2013) Criteria for the definition of similarity thresholds for identifying essentially derived varieties. Plant Breeding, 132(6): 525-531
Peakall, R., Smouse, P. E. (2012) GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update. Bioinformatics, 28(19): 2537-2539
Phumichai, C., Doungchan, W., Puddhanon, P., Jampatong, S., Grudloyma, P., Kirdsri, C., Chunwongse, J., Pulam, T. (2008) SSR-based and grain yield-based diversity of hybrid maize in Thailand. Field Crops Research, 108(2): 157-162
Prasanna, B.M. (2012) Diversity in global maize germplasm: Characterization and utilization. Journal of Biosciences, 37(5): 843-855
Reif, J.C., Hamrit, S., Heckenberger, M., Schipprack, W., Maurer, H.P., Bohn, M., Melchinger, A.E. (2005) Trends in genetic diversity among European maize cultivars and their parental components during the past 50 years. Theoretical and Applied Genetics, 111(5): 838-845
Ribeiro, C.A.G., Pinto, M.de O., Maciel, T.E.F., Pastina, M.M., de Barros, E.G., Guimarães, C.T. (2017) Universal tail sequence-SSR applied to molecular characterization of tropical maize hybrids. Scientia Agricola, 74(2): 163-168
Ritland, K. (1996) Estimators for pairwise relatedness and individual inbreeding coefficients. Genetical Research, 67(02): 175
Romero-Severson, J., Smith, J. S. C., Ziegle, J., Hauser, J., Joe, L., Hookstra, G. (2001) Pedigree analysis and haplotype sharing within diverse groups of Zea mays L. inbreds. Theoretical and Applied Genetics, 103(4): 567-574
Semagn, K., Beyene, Y., Makumbi, D., Mugo, S., Prasanna, B. M., Magorokosho, C., Atlin, G. (2012) Quality control genotyping for assessment of genetic identity and purity in diverse tropical maize inbred lines. Theoretical and Applied Genetics, 125(7): 1487-1501
Smith, J. S.C., Smith, O.S., Wright, S., Wall, S.J., Walton, M. (1992) Diversity of U.S. Hybrid Maize Germplasm as Revealed by Restriction Fragment Length Polymorphisms. Crop Science, 32(3): 598
Smith, J.S.C., Desbons, P., Gogerty, J., Niebur, W.S. (2006) Changes in parentage and genetic diversity of widely used maize hybrids grown in the northern United States and France from 1930 to the present. Mapdica, 51(1); 57-77
Smith, S. (2007) Pedigree Background Changes in U.S. Hybrid Maize between 1980 and 2004. Crop Science, 47(5): 1914
Sun, G.L., William, M., Liu, J., Kasha, K.J., Pauls, K.P. (2001) Microsatellite and RAPD polymosphisms in Ontario corn hybridos are related to the commercial sources and maturity ratings. Molecular Breeding, 7(1): 13-24
Tabanao, D.A., Bernardo, R. (2005) Genetic Variation in Maize Breeding Populations with Different Numbers of Parents. Crop Science, 45(6): 2301
Technow, F., Schrag, T. A., Schipprack, W., Melchinger, A. E. (2014) Identification of key ancestors of modern germplasm in a breeding program of maize. Theoretical and Applied Genetics, 127(12): 2545-2553
Tenaillon, M.I., Charcosset, A. (2011) A European perspective on maize history. Comptes Rendus Biologies, 334(3): 221-228
van de Wouw, M., van Hintum, T., Kik, C., van Treuren, R., Visser, B. (2010) Genetic diversity trends in twentieth century crop cultivars: a meta analysis. Theoretical and Applied Genetics, 120(6): 1241-1252
Xu, S., Liu, J., Liu, G. (2004) The use of SSRs for predicting the hybrid yield and yield heterosis in 15 key inbred lines of Chinese maize. Hereditas, 141(3): 207-15
 

O članku

jezik rada: engleski
vrsta rada: izvorni naučni članak
DOI: 10.5937/ratpov55-17535
objavljen u SCIndeksu: 16.10.2018.
metod recenzije: dvostruko anoniman
Creative Commons License 4.0

Povezani članci

Nema povezanih članaka